Western Blot:Article Title: Nuclear pore protein NUP88 activates anaphase-promoting complex to promote aneuploidy
Article Snippet: .. Primary Abs used for Western blotting were: rat anti–HA-peroxidase (clone 3F10, 12013819001, 1:1,000; Roche); mouse anti-NUP88 (clone H-7, sc-365868, 1:20,000; Santa Cruz Biotechnology Inc.); mouse anti-CDC27 (610455, 1:1,000; BD Transduction Laboratories); mouse anti-RanBP2 (clone D-4, sc-74518, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti–β-actin (clone AC-15, 061M4808, 1:40,000; Sigma-Aldrich); mouse anti-securin (DCS-280, ab3305, 1:1,000; Abcam); rabbit anti–cyclin B1 (4138S, 1:1,000; Cell Signaling Technology); mouse anti-BUBR1 (612503, 1:1,000; BD Transduction Laboratories); goat anti-CDC16/APC6 (clone K-16, sc-6395, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti-CDH1 (FZR1) (DCS-266, ab3242, 1:1,000; Abcam); mouse anti-CDC20 (p55) (clone H-7, sc-5296, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti-PLK1 (clone F-8, sc-17783, 1:1,000; Santa Cruz Biotechnology, Inc.); rabbit anti–p-HH3 (Ser10) (06-570, 1:40,000; EMD Millipore); rabbit anti-RAE1 (1:20,000, described in ref. 45 ); rabbit anti-NUP98 (1:10,000; described in ref. 44 ); rabbit anti-CRM1 (1:10,000; provided by Maarten Fornerod, Erasmus University, Rotterdam, Netherlands); rabbit anti–cyclin A2 antiserum (1:80,000; in-house); affinity-purified rabbit anti–NUP214 antiserum (1:1,000; in-house); mouse anti–AIM-1/aurora B (611083, 1:2,000; BD Transduction Laboratories); mouse anti–aurora A (ab13824, 1:1,000; Abcam); rabbit anti–topo IIα (1:1,000; Topogen); mouse anti–α-tubulin (clone DM1A, T-9026, 1:20,000; Sigma-Aldrich); and rabbit anti-H3 (1:10,000; gift of Zhiguo Zhang, Mayo Clinic, Rochester, Minnesota, USA). ..
Article Title: Nuclear pore protein NUP88 activates anaphase-promoting complex to promote aneuploidy
Article Snippet: .. Primary Abs used for Western blotting were: rat anti–HA-peroxidase (clone 3F10, 12013819001, 1:1,000; Roche); mouse anti-NUP88 (clone H-7, sc-365868, 1:20,000; Santa Cruz Biotechnology Inc.); mouse anti-CDC27 (610455, 1:1,000; BD Transduction Laboratories); mouse anti-RanBP2 (clone D-4, sc-74518, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti–βactin (clone AC-15, 061M4808, 1:40,000; Sigma-Aldrich); mouse anti-securin (DCS-280, ab3305, 1:1,000; Abcam); rabbit anti–cyclin B1 (4138S, 1:1,000; Cell Signaling Technology); mouse anti-BUBR1 (612503, 1:1,000; BD Transduction Laboratories); goat anti-CDC16/ APC6 (clone K-16, sc-6395, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti-CDH1 (FZR1) (DCS-266, ab3242, 1:1,000; Abcam); mouse anti-CDC20 (p55) (clone H-7, sc-5296, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti-PLK1 (clone F-8, sc-17783, 1:1,000; Santa Cruz Biotechnology, Inc.); rabbit anti–p-HH3 (Ser10) (06-570, 1:40,000; EMD Millipore); rabbit anti-RAE1 (1:20,000, described in ref. 45); rabbit anti-NUP98 (1:10,000; described in ref. 44); rabbit anti-CRM1 (1:10,000; provided by Maarten Fornerod, Erasmus University, Rotterdam, Netherlands); rabbit anti–cyclin A2 antiserum (1:80,000; in-house); affinity-purified rabbit anti–NUP214 antiserum (1:1,000; in-house); mouse anti–AIM-1/aurora B (611083, 1:2,000; BD Transduction Laboratories); mouse anti–aurora A (ab13824, 1:1,000; Abcam); rabbit anti–topo IIα (1:1,000; Topogen); mouse anti–α-tubulin (clone DM1A, T-9026, 1:20,000; SigmaAldrich); and rabbit anti-H3 (1:10,000; gift of Zhiguo Zhang, Mayo Clinic, Rochester, Minnesota, USA). ..
Article Title: Nuclear-capture of endosomes depletes nuclear G-actin to promote SRF/MRTF activation and cancer cell invasion
Article Snippet: For chromatin immunoprecipitation, antibodies were rabbit anti-SRF (Cell Signaling Technologies, #5147, 5 μg/immunoprecipitation), rabbit anti-MRTF-A (Cell Signaling Technologies, #14760, 5 μg/immunoprecipitation) and mouse anti-ELK-1 (Santa Cruz, sc-365876, 5 μg/immunoprecipitation). .. For the TurboID experiments, we used mouse anti-RanBP2 (Santa Cruz, sc-74518, dilution: WB 1 : 500), rabbit anti-Nup214 (Bethyl Laboratories, A300-716A-M, dilution: WB 1 : 300), rabbit anti-POM121 (Genetex, GTX102128, dilution: WB 1 : 1000), mouse anti-Nup133 (Santa Cruz, sc-376763, dilution: WB 1 : 500), mouse anti-Nup88 (BD Biosciences, 611896, dilution: WB 1 : 1000), mouse anti-Nup50 (Santa Cruz, sc-398993, dilution: WB 1 : 250), goat anti-laminA/C (Santa Cruz, sc-6215, dilution: WB 1 : 1000) and mouse anti-V5-Tag (Thermo, MA5-15253, dilution: WB 1 : 1000; IF 1 : 100). .. Cell lysates were prepared in a buffer containing 200 mM NaCl, 75 mM Tris-HCl pH 7, 15 mM NaF, 1.5 mM Na 3 VO 4 , 7.5 mM EDTA, 7.5 mM EGTA, 0.15% (v/v) Tween-20, and protein inhibitors (Thermo Fisher).
Affinity Purification:Article Title: Nuclear pore protein NUP88 activates anaphase-promoting complex to promote aneuploidy
Article Snippet: .. Primary Abs used for Western blotting were: rat anti–HA-peroxidase (clone 3F10, 12013819001, 1:1,000; Roche); mouse anti-NUP88 (clone H-7, sc-365868, 1:20,000; Santa Cruz Biotechnology Inc.); mouse anti-CDC27 (610455, 1:1,000; BD Transduction Laboratories); mouse anti-RanBP2 (clone D-4, sc-74518, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti–β-actin (clone AC-15, 061M4808, 1:40,000; Sigma-Aldrich); mouse anti-securin (DCS-280, ab3305, 1:1,000; Abcam); rabbit anti–cyclin B1 (4138S, 1:1,000; Cell Signaling Technology); mouse anti-BUBR1 (612503, 1:1,000; BD Transduction Laboratories); goat anti-CDC16/APC6 (clone K-16, sc-6395, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti-CDH1 (FZR1) (DCS-266, ab3242, 1:1,000; Abcam); mouse anti-CDC20 (p55) (clone H-7, sc-5296, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti-PLK1 (clone F-8, sc-17783, 1:1,000; Santa Cruz Biotechnology, Inc.); rabbit anti–p-HH3 (Ser10) (06-570, 1:40,000; EMD Millipore); rabbit anti-RAE1 (1:20,000, described in ref. 45 ); rabbit anti-NUP98 (1:10,000; described in ref. 44 ); rabbit anti-CRM1 (1:10,000; provided by Maarten Fornerod, Erasmus University, Rotterdam, Netherlands); rabbit anti–cyclin A2 antiserum (1:80,000; in-house); affinity-purified rabbit anti–NUP214 antiserum (1:1,000; in-house); mouse anti–AIM-1/aurora B (611083, 1:2,000; BD Transduction Laboratories); mouse anti–aurora A (ab13824, 1:1,000; Abcam); rabbit anti–topo IIα (1:1,000; Topogen); mouse anti–α-tubulin (clone DM1A, T-9026, 1:20,000; Sigma-Aldrich); and rabbit anti-H3 (1:10,000; gift of Zhiguo Zhang, Mayo Clinic, Rochester, Minnesota, USA). ..
Article Title: Nuclear pore protein NUP88 activates anaphase-promoting complex to promote aneuploidy
Article Snippet: .. Primary Abs used for Western blotting were: rat anti–HA-peroxidase (clone 3F10, 12013819001, 1:1,000; Roche); mouse anti-NUP88 (clone H-7, sc-365868, 1:20,000; Santa Cruz Biotechnology Inc.); mouse anti-CDC27 (610455, 1:1,000; BD Transduction Laboratories); mouse anti-RanBP2 (clone D-4, sc-74518, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti–βactin (clone AC-15, 061M4808, 1:40,000; Sigma-Aldrich); mouse anti-securin (DCS-280, ab3305, 1:1,000; Abcam); rabbit anti–cyclin B1 (4138S, 1:1,000; Cell Signaling Technology); mouse anti-BUBR1 (612503, 1:1,000; BD Transduction Laboratories); goat anti-CDC16/ APC6 (clone K-16, sc-6395, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti-CDH1 (FZR1) (DCS-266, ab3242, 1:1,000; Abcam); mouse anti-CDC20 (p55) (clone H-7, sc-5296, 1:1,000; Santa Cruz Biotechnology Inc.); mouse anti-PLK1 (clone F-8, sc-17783, 1:1,000; Santa Cruz Biotechnology, Inc.); rabbit anti–p-HH3 (Ser10) (06-570, 1:40,000; EMD Millipore); rabbit anti-RAE1 (1:20,000, described in ref. 45); rabbit anti-NUP98 (1:10,000; described in ref. 44); rabbit anti-CRM1 (1:10,000; provided by Maarten Fornerod, Erasmus University, Rotterdam, Netherlands); rabbit anti–cyclin A2 antiserum (1:80,000; in-house); affinity-purified rabbit anti–NUP214 antiserum (1:1,000; in-house); mouse anti–AIM-1/aurora B (611083, 1:2,000; BD Transduction Laboratories); mouse anti–aurora A (ab13824, 1:1,000; Abcam); rabbit anti–topo IIα (1:1,000; Topogen); mouse anti–α-tubulin (clone DM1A, T-9026, 1:20,000; SigmaAldrich); and rabbit anti-H3 (1:10,000; gift of Zhiguo Zhang, Mayo Clinic, Rochester, Minnesota, USA). ..
other:Article Title: Human regulator of telomere elongation helicase 1 (RTEL1) is required for the nuclear and cytoplasmic trafficking of pre-U2 RNA
Article Snippet: The following are other antibodies used in this study: anti-actin-HRP (horseradish peroxidase) (Santa Cruz, sc-47778), mouse anti-PCNA (Abcam, ab29), rabbit anti-XPO1-C-terminal (Santa Cruz, sc-5595), mouse anti-XPO1-N-terminal (Santa Cruz, sc-136220), mouse anti-Coilin (Sigma C-1862), mouse anti-XPO5 (Abcam ab57491), mouse anti-XPOT (Abcam ab49933), rabbit anti-H3 (Abcam ab1791), mouse anti-GEMIN5 (Santa Cruz, sc-136200), mouse anti-SMN1 (Abcam, ab5831), goat anti-LaminB (Santa Cruz, sc-6216), mouse anti-CSE1L (Santa Cruz sc-135855), rabbit anti-Dyskerin (Santa Cruz sc-48794), rabbit anti-PHAX (Bethyl, A303–916A), goat anti-PHAX (M-19) (Santa Cruz, sc-11704), mouse anti-UBF1 (Santa Cruz sc-13125), mouse anti-nucleolin (Enzo, ADI-KAM-CP100) mouse anti-TRF2 (Imgenex, IG124A), mouse anti-XPO5 (Abcam ab57491), mouse anti-NFKB (Santa Cruz sc-372), mouse anti-RANBP2 (Santa Cruz, sc-74518), mouse anti-Fibrillarin (Abcam, ab4566), mouse anti-FLAG M2 (Sigma), IgG mouse (Santa Cruz sc-2025), mouse anti-coilin (Sigma, C1862), rabbit anti-TCAB1 (Novus, NB100–68252); IgG rabbit (Abcam ab37415).
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